J5_4CUV_002

3D structure

PDB id

4CUV (explore in PDB, NAKB, or RNA 3D Hub)

Description

Kluyveromyces lactis 80S ribosome in complex with CrPV-IRES

Experimental method

ELECTRON MICROSCOPY

Resolution

3.7 Å

Loop

Sequence

GGAGUC*GGAC*GUUC*GC*GCAGAUC

Length

23 nucleotides

Bulged bases

4CUV|1|1|U|1436

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4CUV|1|1|G|658
4CUV|1|1|G|659
4CUV|1|1|A|660
4CUV|1|1|G|661
4CUV|1|1|U|662
4CUV|1|1|C|663
*
4CUV|1|1|G|799
4CUV|1|1|G|800
4CUV|1|1|A|801
4CUV|1|1|C|802
*
4CUV|1|1|G|941
4CUV|1|1|U|942
4CUV|1|1|U|943
4CUV|1|1|C|944
*
4CUV|1|1|G|1375
4CUV|1|1|C|1376
*
4CUV|1|1|G|1431
4CUV|1|1|C|1432
4CUV|1|1|A|1433
4CUV|1|1|G|1434
4CUV|1|1|A|1435
4CUV|1|1|U|1436
4CUV|1|1|C|1437

Current chains

Chain 1

25S RRNA

Nearby chains

Chain 4

5.8S RRNA