J5_4CUV_003

3D structure

PDB id

4CUV (explore in PDB, NAKB, or RNA 3D Hub)

Description

Kluyveromyces lactis 80S ribosome in complex with CrPV-IRES

Experimental method

ELECTRON MICROSCOPY

Resolution

3.7 Å

Loop

Sequence

CGAG*CGUAA*UGAACGUAG*CGA*UAAGAG

Length

27 nucleotides

Bulged bases

4CUV|1|1|U|719, 4CUV|1|1|A|784, 4CUV|1|1|G|785

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4CUV|1|1|C|675
4CUV|1|1|G|676
4CUV|1|1|A|677
4CUV|1|1|G|678
*
4CUV|1|1|C|702
4CUV|1|1|G|703
4CUV|1|1|U|704
4CUV|1|1|A|705
4CUV|1|1|A|706
*
4CUV|1|1|U|713
4CUV|1|1|G|714
4CUV|1|1|A|715
4CUV|1|1|A|716
4CUV|1|1|C|717
4CUV|1|1|G|718
4CUV|1|1|U|719
4CUV|1|1|A|720
4CUV|1|1|G|721
*
4CUV|1|1|C|749
4CUV|1|1|G|750
4CUV|1|1|A|751
*
4CUV|1|1|U|782
4CUV|1|1|A|783
4CUV|1|1|A|784
4CUV|1|1|G|785
4CUV|1|1|A|786
4CUV|1|1|G|787

Current chains

Chain 1

25S RRNA

Nearby chains