J5_4CUV_004

3D structure

PDB id

4CUV (explore in PDB, NAKB, or RNA 3D Hub)

Description

Kluyveromyces lactis 80S ribosome in complex with CrPV-IRES

Experimental method

ELECTRON MICROSCOPY

Resolution

3.7 Å

Loop

Sequence

GCAAAAUAG*UG*UG*CGGACAAGG*CAC

Length

25 nucleotides

Bulged bases

4CUV|1|1|G|2116, 4CUV|1|1|G|2121

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4CUV|1|1|G|1906
4CUV|1|1|C|1907
4CUV|1|1|A|1908
4CUV|1|1|A|1909
4CUV|1|1|A|1910
4CUV|1|1|A|1911
4CUV|1|1|U|1912
4CUV|1|1|A|1913
4CUV|1|1|G|1914
*
4CUV|1|1|U|1938
4CUV|1|1|G|1939
*
4CUV|1|1|U|2109
4CUV|1|1|G|2110
*
4CUV|1|1|C|2114
4CUV|1|1|G|2115
4CUV|1|1|G|2116
4CUV|1|1|A|2117
4CUV|1|1|C|2118
4CUV|1|1|A|2119
4CUV|1|1|A|2120
4CUV|1|1|G|2121
4CUV|1|1|G|2122
*
4CUV|1|1|C|2331
4CUV|1|1|A|2332
4CUV|1|1|C|2333

Current chains

Chain 1

25S RRNA

Nearby chains