J5_4CUX_003

3D structure

PDB id

4CUX (explore in PDB, NAKB, or RNA 3D Hub)

Description

Kluyveromyces lactis 80S ribosome in complex with CrPV-IRES

Experimental method

ELECTRON MICROSCOPY

Resolution

3.7 Å

Loop

Sequence

CAUG*CGAAUGGC*GAG*CAC*GGCAG

Length

23 nucleotides

Bulged bases

4CUX|1|2|U|56, 4CUX|1|2|A|93, 4CUX|1|2|C|424

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4CUX|1|2|C|54
4CUX|1|2|A|55
4CUX|1|2|U|56
4CUX|1|2|G|57
*
4CUX|1|2|C|90
4CUX|1|2|G|91
4CUX|1|2|A|92
4CUX|1|2|A|93
4CUX|1|2|U|94
4CUX|1|2|G|95
4CUX|1|2|G|96
4CUX|1|2|C|97
*
4CUX|1|2|G|386
4CUX|1|2|A|387
4CUX|1|2|G|388
*
4CUX|1|2|C|409
4CUX|1|2|A|410
4CUX|1|2|C|411
*
4CUX|1|2|G|422
4CUX|1|2|G|423
4CUX|1|2|C|424
4CUX|1|2|A|425
4CUX|1|2|G|426

Current chains

Chain 2

18S RRNA

Nearby chains