J5_4TUB_008
3D structure
- PDB id
- 4TUB (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal structure of tRNA-Thr bound to Codon ACC-C on the Ribosome
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.6 Å
Loop
- Sequence
- AAAAGACC*GGAUAACA*UCGAUGUC*GGUUCAG*CGGUCU
- Length
- 37 nucleotides
- Bulged bases
- 4TUB|1|RA|A|2084, 4TUB|1|RA|A|2460, 4TUB|1|RA|U|2461, 4TUB|1|RA|U|2621
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
4TUB|1|RA|A|2079
4TUB|1|RA|A|2080
4TUB|1|RA|A|2081
4TUB|1|RA|A|2082
4TUB|1|RA|G|2083
4TUB|1|RA|A|2084
4TUB|1|RA|C|2085
4TUB|1|RA|C|2086
*
4TUB|1|RA|G|2458
4TUB|1|RA|G|2459
4TUB|1|RA|A|2460
4TUB|1|RA|U|2461
4TUB|1|RA|A|2462
4TUB|1|RA|A|2463
4TUB|1|RA|C|2464
4TUB|1|RA|A|2465
*
4TUB|1|RA|U|2512
4TUB|1|RA|C|2513
4TUB|1|RA|G|2514
4TUB|1|RA|A|2515
4TUB|1|RA|U|2516
4TUB|1|RA|G|2517
4TUB|1|RA|U|2518
4TUB|1|RA|C|2519
*
4TUB|1|RA|G|2594
4TUB|1|RA|G|2595
4TUB|1|RA|U|2596
4TUB|1|RA|U|2597
4TUB|1|RA|C|2598
4TUB|1|RA|A|2599
4TUB|1|RA|G|2600
*
4TUB|1|RA|C|2618
4TUB|1|RA|G|2619
4TUB|1|RA|G|2620
4TUB|1|RA|U|2621
4TUB|1|RA|C|2622
4TUB|1|RA|U|2623
Current chains
- Chain RA
- 23S rRNA
Nearby chains
- Chain QV
- Transfer RNA; tRNA
- Chain R0
- 50S ribosomal protein L27
- Chain R5
- 50S ribosomal protein L32
- Chain RD
- 50S ribosomal protein L2
- Chain RE
- 50S ribosomal protein L3
- Chain RF
- 50S ribosomal protein L4
- Chain RW
- 50S ribosomal protein L22
- Chain Z5
- CC-Puro
Coloring options: