J5_4UG0_003
3D structure
- PDB id
- 4UG0 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- STRUCTURE OF THE HUMAN 80S RIBOSOME
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.6 Å
Loop
- Sequence
- CGAG*CGCAA*UGAAGGCCGGCGCGCUCGCCGGCCGAG*CGG*CACGAG
- Length
- 45 nucleotides
- Bulged bases
- 4UG0|1|L5|C|1407, 4UG0|1|L5|C|1409, 4UG0|1|L5|U|1410, 4UG0|1|L5|C|1501
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
4UG0|1|L5|C|1352
4UG0|1|L5|G|1353
4UG0|1|L5|A|1354
4UG0|1|L5|G|1355
*
4UG0|1|L5|C|1384
4UG0|1|L5|G|1385
4UG0|1|L5|C|1386
4UG0|1|L5|A|1387
4UG0|1|L5|A|1388
*
4UG0|1|L5|U|1395
4UG0|1|L5|G|1396
4UG0|1|L5|A|1397
4UG0|1|L5|A|1398
4UG0|1|L5|G|1399
4UG0|1|L5|G|1400
4UG0|1|L5|C|1401
4UG0|1|L5|C|1402
4UG0|1|L5|G|1403
4UG0|1|L5|G|1404
4UG0|1|L5|C|1405
4UG0|1|L5|G|1406
4UG0|1|L5|C|1407
4UG0|1|L5|G|1408
4UG0|1|L5|C|1409
4UG0|1|L5|U|1410
4UG0|1|L5|C|1411
4UG0|1|L5|G|1412
4UG0|1|L5|C|1413
4UG0|1|L5|C|1414
4UG0|1|L5|G|1415
4UG0|1|L5|G|1416
4UG0|1|L5|C|1417
4UG0|1|L5|C|1418
4UG0|1|L5|G|1419
4UG0|1|L5|A|1420
4UG0|1|L5|G|1421
*
4UG0|1|L5|C|1464
4UG0|1|L5|G|1465
4UG0|1|L5|G|1466
*
4UG0|1|L5|C|1499
4UG0|1|L5|A|1500
4UG0|1|L5|C|1501
4UG0|1|L5|G|1502
4UG0|1|L5|A|1503
4UG0|1|L5|G|1504
Current chains
- Chain L5
- 28S ribosomal RNA
Nearby chains
- Chain LC
- 60S RIBOSOMAL PROTEIN L4
- Chain LL
- 60S RIBOSOMAL PROTEIN L13
- Chain LQ
- 60S RIBOSOMAL PROTEIN L18
- Chain LT
- 60S RIBOSOMAL PROTEIN L21
- Chain La
- 60S RIBOSOMAL PROTEIN L27A
- Chain Lb
- 60S RIBOSOMAL PROTEIN L29
- Chain Li
- 60S RIBOSOMAL PROTEIN L36
Coloring options: