J5_4UY8_005
3D structure
- PDB id
- 4UY8 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Molecular basis for the ribosome functioning as a L-tryptophan sensor - Cryo-EM structure of a TnaC stalled E.coli ribosome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.8 Å
Loop
- Sequence
- GAAAGACC*GGAUAACA*UCGAUGU*GUUUAG*CGGUCC
- Length
- 35 nucleotides
- Bulged bases
- 4UY8|1|A|A|2062, 4UY8|1|A|A|2448, 4UY8|1|A|U|2449, 4UY8|1|A|U|2585, 4UY8|1|A|U|2609
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
4UY8|1|A|G|2057
4UY8|1|A|A|2058
4UY8|1|A|A|2059
4UY8|1|A|A|2060
4UY8|1|A|G|2061
4UY8|1|A|A|2062
4UY8|1|A|C|2063
4UY8|1|A|C|2064
*
4UY8|1|A|G|2446
4UY8|1|A|G|2447
4UY8|1|A|A|2448
4UY8|1|A|U|2449
4UY8|1|A|A|2450
4UY8|1|A|A|2451
4UY8|1|A|C|2452
4UY8|1|A|A|2453
*
4UY8|1|A|U|2500
4UY8|1|A|C|2501
4UY8|1|A|G|2502
4UY8|1|A|A|2503
4UY8|1|A|U|2504
4UY8|1|A|G|2505
4UY8|1|A|U|2506
*
4UY8|1|A|G|2583
4UY8|1|A|U|2584
4UY8|1|A|U|2585
4UY8|1|A|U|2586
4UY8|1|A|A|2587
4UY8|1|A|G|2588
*
4UY8|1|A|C|2606
4UY8|1|A|G|2607
4UY8|1|A|G|2608
4UY8|1|A|U|2609
4UY8|1|A|C|2610
4UY8|1|A|C|2611
Current chains
- Chain A
- RRNA-23S RIBOSOMAL RNA
Nearby chains
- Chain 0
- 50S RIBOSOMAL PROTEIN L32
- Chain 7
- TRYPTOPHANASE
- Chain C
- 50S RIBOSOMAL PROTEIN L2
- Chain D
- 50S RIBOSOMAL PROTEIN L3
- Chain E
- 50S RIBOSOMAL PROTEIN L4
- Chain L
- 50S RIBOSOMAL PROTEIN L15
- Chain M
- 50S RIBOSOMAL PROTEIN L16
- Chain S
- 50S RIBOSOMAL PROTEIN L22
- Chain V
- Transfer RNA; tRNA
Coloring options: