J5_4V19_002
3D structure
- PDB id
- 4V19 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the large subunit of the mammalian mitoribosome, part 1 of 2
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.4 Å
Loop
- Sequence
- AGAAGACC*GGAUAACA*UCGAUGUU*AGUUCAG*CGGUUU
- Length
- 37 nucleotides
- Bulged bases
- 4V19|1|A|A|1269, 4V19|1|A|U|1270, 4V19|1|A|G|1326, 4V19|1|A|U|1327, 4V19|1|A|U|1430, 4V19|1|A|U|1431
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
4V19|1|A|A|1050
4V19|1|A|G|1051
4V19|1|A|A|1052
4V19|1|A|A|1053
4V19|1|A|G|1054
4V19|1|A|A|1055
4V19|1|A|C|1056
4V19|1|A|C|1057
*
4V19|1|A|G|1267
4V19|1|A|G|1268
4V19|1|A|A|1269
4V19|1|A|U|1270
4V19|1|A|A|1271
4V19|1|A|A|1272
4V19|1|A|C|1273
4V19|1|A|A|1274
*
4V19|1|A|U|1321
4V19|1|A|C|1322
4V19|1|A|G|1323
4V19|1|A|A|1324
4V19|1|A|U|1325
4V19|1|A|G|1326
4V19|1|A|U|1327
4V19|1|A|U|1328
*
4V19|1|A|A|1403
4V19|1|A|G|1404
4V19|1|A|U|1405
4V19|1|A|U|1406
4V19|1|A|C|1407
4V19|1|A|A|1408
4V19|1|A|G|1409
*
4V19|1|A|C|1427
4V19|1|A|G|1428
4V19|1|A|G|1429
4V19|1|A|U|1430
4V19|1|A|U|1431
4V19|1|A|U|1432
Current chains
- Chain A
- MITORIBOSOMAL 16S RRNA
Nearby chains
- Chain 5
- MITORIBOSOMAL PROTEIN BL32M, MRPL32
- Chain C
- TRNA
- Chain E
- MITORIBOSOMAL PROTEIN UL3M, MRPL3
- Chain F
- MITORIBOSOMAL PROTEIN UL4M, MRPL4
- Chain P
- MITORIBOSOMAL PROTEIN UL15M, MRPL15
- Chain Q
- MITORIBOSOMAL PROTEIN UL16M, MRPL16
- Chain W
- MITORIBOSOMAL PROTEIN UL22M, MRPL22
- Chain Z
- TRNA
Coloring options: