J5_4V4A_005

3D structure

PDB id

4V4A (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal Structure of the Wild Type Ribosome from E. Coli 70S Ribosome.

Experimental method

X-RAY DIFFRACTION

Resolution

9.5 Å

Loop

Sequence

GCAAUCUCAC*GUC*GC*GUGAAUAGG*CGC

Length

27 nucleotides

Bulged bases

4V4A|1|B0|G|1754

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4V4A|1|B0|G|1691
4V4A|1|B0|C|1692
4V4A|1|B0|A|1693
4V4A|1|B0|A|1694
4V4A|1|B0|U|1695
4V4A|1|B0|C|1696
4V4A|1|B0|U|1697
4V4A|1|B0|C|1698
4V4A|1|B0|A|1699
4V4A|1|B0|C|1700
*
4V4A|1|B0|G|1722
4V4A|1|B0|U|1723
4V4A|1|B0|C|1724
*
4V4A|1|B0|G|1742
4V4A|1|B0|C|1743
*
4V4A|1|B0|G|1747
4V4A|1|B0|U|1748
4V4A|1|B0|G|1749
4V4A|1|B0|A|1750
4V4A|1|B0|A|1751
4V4A|1|B0|U|1752
4V4A|1|B0|A|1753
4V4A|1|B0|G|1754
4V4A|1|B0|G|1755
*
4V4A|1|B0|C|1971
4V4A|1|B0|G|1972
4V4A|1|B0|C|1973

Current chains

Chain B0

23S RIBOSOMAL RNA

Nearby chains

Chain AA

Small subunit ribosomal RNA; SSU rRNA

Chain BB

50S ribosomal protein L3

Chain BI

50S ribosomal protein L14

Chain BN

50S ribosomal protein L19