J5_4V4S_005

3D structure

PDB id

4V4S (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the whole ribosomal complex.

Experimental method

X-RAY DIFFRACTION

Resolution

6.76 Å

Loop

Sequence

GCAAGUUGGCC*GGUG*CC*GUGAACAGG*CGC

Length

29 nucleotides

Bulged bases

4V4S|1|BA|G|1758, 4V4S|1|BA|G|1763

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4V4S|1|BA|G|1674
4V4S|1|BA|C|1675
4V4S|1|BA|A|1676
4V4S|1|BA|A|1677
4V4S|1|BA|G|1678
4V4S|1|BA|U|1679
4V4S|1|BA|U|1680
4V4S|1|BA|G|1681
4V4S|1|BA|G|1682
4V4S|1|BA|C|1683
4V4S|1|BA|C|1684
*
4V4S|1|BA|G|1704
4V4S|1|BA|G|1705
4V4S|1|BA|U|1706
4V4S|1|BA|G|1707
*
4V4S|1|BA|C|1751
4V4S|1|BA|C|1752
*
4V4S|1|BA|G|1756
4V4S|1|BA|U|1757
4V4S|1|BA|G|1758
4V4S|1|BA|A|1759
4V4S|1|BA|A|1760
4V4S|1|BA|C|1761
4V4S|1|BA|A|1762
4V4S|1|BA|G|1763
4V4S|1|BA|G|1764
*
4V4S|1|BA|C|1988
4V4S|1|BA|G|1989
4V4S|1|BA|C|1990

Current chains

Chain BA

23S ribosomal RNA

Nearby chains

Chain AA

Small subunit ribosomal RNA; SSU rRNA

Chain BE

50S ribosomal protein L3

Chain BO

50S ribosomal protein L14

Chain BT

50S ribosomal protein L19