3D structure

PDB id
4V66 (explore in PDB, NAKB, or RNA 3D Hub)
Description
Structure of the E. coli ribosome and the tRNAs in Post-accommodation state
Experimental method
ELECTRON MICROSCOPY
Resolution
9 Å

Loop

Sequence
CGCUGG*CGUG*CUUUCAG*CAGAAGAAG*CAAGCG
Length
32 nucleotides
Bulged bases
None detected
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

4V66|1|A1|C|34
4V66|1|A1|G|35
4V66|1|A1|C|36
4V66|1|A1|U|37
4V66|1|A1|G|38
4V66|1|A1|G|39
*
4V66|1|A1|C|403
4V66|1|A1|G|404
4V66|1|A1|U|405
4V66|1|A1|G|406
*
4V66|1|A1|C|436
4V66|1|A1|U|437
4V66|1|A1|U|438
4V66|1|A1|U|439
4V66|1|A1|C|440
4V66|1|A1|A|441
4V66|1|A1|G|442
*
4V66|1|A1|C|492
4V66|1|A1|A|493
4V66|1|A1|G|494
4V66|1|A1|A|495
4V66|1|A1|A|496
4V66|1|A1|G|497
4V66|1|A1|A|498
4V66|1|A1|A|499
4V66|1|A1|G|500
*
4V66|1|A1|C|545
4V66|1|A1|A|546
4V66|1|A1|A|547
4V66|1|A1|G|548
4V66|1|A1|C|549
4V66|1|A1|G|550

Current chains

Chain A1
16S rRNA

Nearby chains

Chain AD
30S ribosomal protein S12
Chain AR
30S ribosomal protein S4

Coloring options:

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