J5_4V68_008
3D structure
- PDB id
- 4V68 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- T. thermophilus 70S ribosome in complex with mRNA, tRNAs and EF-Tu.GDP.kirromycin ternary complex, fitted to a 6.4 A Cryo-EM map.
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 6.4 Å
Loop
- Sequence
- AAAAGACC*GGAUAACA*UCGAUGUC*GGUUCAG*CGGUCU
- Length
- 37 nucleotides
- Bulged bases
- 4V68|1|BA|A|2062, 4V68|1|BA|A|2448, 4V68|1|BA|U|2449, 4V68|1|BA|U|2585, 4V68|1|BA|U|2609
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
4V68|1|BA|A|2057
4V68|1|BA|A|2058
4V68|1|BA|A|2059
4V68|1|BA|A|2060
4V68|1|BA|G|2061
4V68|1|BA|A|2062
4V68|1|BA|C|2063
4V68|1|BA|C|2064
*
4V68|1|BA|G|2446
4V68|1|BA|G|2447
4V68|1|BA|A|2448
4V68|1|BA|U|2449
4V68|1|BA|A|2450
4V68|1|BA|A|2451
4V68|1|BA|C|2452
4V68|1|BA|A|2453
*
4V68|1|BA|U|2500
4V68|1|BA|C|2501
4V68|1|BA|G|2502
4V68|1|BA|A|2503
4V68|1|BA|U|2504
4V68|1|BA|G|2505
4V68|1|BA|U|2506
4V68|1|BA|C|2507
*
4V68|1|BA|G|2582
4V68|1|BA|G|2583
4V68|1|BA|U|2584
4V68|1|BA|U|2585
4V68|1|BA|C|2586
4V68|1|BA|A|2587
4V68|1|BA|G|2588
*
4V68|1|BA|C|2606
4V68|1|BA|G|2607
4V68|1|BA|G|2608
4V68|1|BA|U|2609
4V68|1|BA|C|2610
4V68|1|BA|U|2611
Current chains
- Chain BA
- 23S rRNA
Nearby chains
- Chain AV
- Transfer RNA; tRNA
- Chain B0
- 50S ribosomal protein L27
- Chain B5
- 50S ribosomal protein L32
- Chain BD
- 50S ribosomal protein L2
- Chain BE
- 50S ribosomal protein L3
- Chain BF
- 50S ribosomal protein L4
- Chain BW
- 50S ribosomal protein L22
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