J5_4V6X_006
3D structure
- PDB id
- 4V6X (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the human 80S ribosome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 5 Å
Loop
- Sequence
- CUUGU*AAAUAAC*GGAAUGAG*CGAGGAUCCAU*AUAG
- Length
- 35 nucleotides
- Bulged bases
- 4V6X|1|B2|A|590, 4V6X|1|B2|C|593
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
4V6X|1|B2|C|30
4V6X|1|B2|U|31
4V6X|1|B2|U|32
4V6X|1|B2|G|33
4V6X|1|B2|U|34
*
4V6X|1|B2|A|521
4V6X|1|B2|A|522
4V6X|1|B2|A|523
4V6X|1|B2|U|524
4V6X|1|B2|A|525
4V6X|1|B2|A|526
4V6X|1|B2|C|527
*
4V6X|1|B2|G|558
4V6X|1|B2|G|559
4V6X|1|B2|A|560
4V6X|1|B2|A|561
4V6X|1|B2|U|562
4V6X|1|B2|G|563
4V6X|1|B2|A|564
4V6X|1|B2|G|565
*
4V6X|1|B2|C|585
4V6X|1|B2|G|586
4V6X|1|B2|A|587
4V6X|1|B2|G|588
4V6X|1|B2|G|589
4V6X|1|B2|A|590
4V6X|1|B2|U|591
4V6X|1|B2|C|592
4V6X|1|B2|C|593
4V6X|1|B2|A|594
4V6X|1|B2|U|595
*
4V6X|1|B2|A|641
4V6X|1|B2|U|642
4V6X|1|B2|A|643
4V6X|1|B2|G|644
Current chains
- Chain B2
- 18S ribosomal RNA
Nearby chains
- Chain AJ
- 40S ribosomal protein S9
- Chain AX
- 40S ribosomal protein S23
- Chain AY
- 40S ribosomal protein S24
- Chain Ae
- 40S ribosomal protein S30
- Chain Az
- Elongation factor 2
Coloring options: