J5_4V6X_010
3D structure
- PDB id
- 4V6X (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the human 80S ribosome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 5 Å
Loop
- Sequence
- AUCUUGG*CCCUUG*CGUU*AUGGAAUAG*CAUGAU
- Length
- 32 nucleotides
- Bulged bases
- 4V6X|1|B2|C|687, 4V6X|1|B2|C|741, 4V6X|1|B2|U|871, 4V6X|1|B2|A|913
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
4V6X|1|B2|A|685
4V6X|1|B2|U|686
4V6X|1|B2|C|687
4V6X|1|B2|U|688
4V6X|1|B2|U|689
4V6X|1|B2|G|690
4V6X|1|B2|G|691
*
4V6X|1|B2|C|739
4V6X|1|B2|C|740
4V6X|1|B2|C|741
4V6X|1|B2|U|742
4V6X|1|B2|U|743
4V6X|1|B2|G|744
*
4V6X|1|B2|C|797
4V6X|1|B2|G|798
4V6X|1|B2|U|799
4V6X|1|B2|U|800
*
4V6X|1|B2|A|865
4V6X|1|B2|U|866
4V6X|1|B2|G|867
4V6X|1|B2|G|868
4V6X|1|B2|A|869
4V6X|1|B2|A|870
4V6X|1|B2|U|871
4V6X|1|B2|A|872
4V6X|1|B2|G|873
*
4V6X|1|B2|C|912
4V6X|1|B2|A|913
4V6X|1|B2|U|914
4V6X|1|B2|G|915
4V6X|1|B2|A|916
4V6X|1|B2|U|917
Current chains
- Chain B2
- 18S ribosomal RNA
Nearby chains
- Chain AH
- 40S ribosomal protein S7
- Chain AL
- 40S ribosomal protein S11
- Chain AN
- 40S ribosomal protein S13
- Chain AW
- 40S ribosomal protein S15a
- Chain CR
- 60S ribosomal protein L19
Coloring options: