J5_4V6Y_007

3D structure

PDB id

4V6Y (explore in PDB, NAKB, or RNA 3D Hub)

Description

E. coli 70S-fMetVal-tRNAVal-tRNAfMet complex in classic pre-translocation state (pre1a)

Experimental method

ELECTRON MICROSCOPY

Resolution

12 Å

Loop

Sequence

GGUUC*GGUGAGUCGACCC*GGAAA*UACU*AAUCGUAC

Length

35 nucleotides

Bulged bases

4V6Y|1|BA|G|1341

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4V6Y|1|BA|G|1310
4V6Y|1|BA|G|1311
4V6Y|1|BA|U|1312
4V6Y|1|BA|U|1313
4V6Y|1|BA|C|1314
*
4V6Y|1|BA|G|1338
4V6Y|1|BA|G|1339
4V6Y|1|BA|U|1340
4V6Y|1|BA|G|1341
4V6Y|1|BA|A|1342
4V6Y|1|BA|G|1343
4V6Y|1|BA|U|1344
4V6Y|1|BA|C|1345
4V6Y|1|BA|G|1346
4V6Y|1|BA|A|1347
4V6Y|1|BA|C|1348
4V6Y|1|BA|C|1349
4V6Y|1|BA|C|1350
*
4V6Y|1|BA|G|1381
4V6Y|1|BA|G|1382
4V6Y|1|BA|A|1383
4V6Y|1|BA|A|1384
4V6Y|1|BA|A|1385
*
4V6Y|1|BA|U|1402
4V6Y|1|BA|A|1403
4V6Y|1|BA|C|1404
4V6Y|1|BA|U|1405
*
4V6Y|1|BA|A|1597
4V6Y|1|BA|A|1598
4V6Y|1|BA|U|1599
4V6Y|1|BA|C|1600
4V6Y|1|BA|G|1601
4V6Y|1|BA|U|1602
4V6Y|1|BA|A|1603
4V6Y|1|BA|C|1604

Current chains

Chain BA

23S ribosomal RNA

Nearby chains

Chain B2

50S ribosomal protein L32

Chain BT

50S ribosomal protein L21