J5_4V6Y_009
3D structure
- PDB id
- 4V6Y (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- E. coli 70S-fMetVal-tRNAVal-tRNAfMet complex in classic pre-translocation state (pre1a)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 12 Å
Loop
- Sequence
- GAAAGACC*GGAUAACAG*CCUCGAUGU*GUUUAGA*UCGGUCC
- Length
- 40 nucleotides
- Bulged bases
- 4V6Y|1|BA|A|2062, 4V6Y|1|BA|A|2448, 4V6Y|1|BA|U|2449, 4V6Y|1|BA|C|2606
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
4V6Y|1|BA|G|2057
4V6Y|1|BA|A|2058
4V6Y|1|BA|A|2059
4V6Y|1|BA|A|2060
4V6Y|1|BA|G|2061
4V6Y|1|BA|A|2062
4V6Y|1|BA|C|2063
4V6Y|1|BA|C|2064
*
4V6Y|1|BA|G|2446
4V6Y|1|BA|G|2447
4V6Y|1|BA|A|2448
4V6Y|1|BA|U|2449
4V6Y|1|BA|A|2450
4V6Y|1|BA|A|2451
4V6Y|1|BA|C|2452
4V6Y|1|BA|A|2453
4V6Y|1|BA|G|2454
*
4V6Y|1|BA|C|2498
4V6Y|1|BA|C|2499
4V6Y|1|BA|U|2500
4V6Y|1|BA|C|2501
4V6Y|1|BA|G|2502
4V6Y|1|BA|A|2503
4V6Y|1|BA|U|2504
4V6Y|1|BA|G|2505
4V6Y|1|BA|U|2506
*
4V6Y|1|BA|G|2583
4V6Y|1|BA|U|2584
4V6Y|1|BA|U|2585
4V6Y|1|BA|U|2586
4V6Y|1|BA|A|2587
4V6Y|1|BA|G|2588
4V6Y|1|BA|A|2589
*
4V6Y|1|BA|U|2605
4V6Y|1|BA|C|2606
4V6Y|1|BA|G|2607
4V6Y|1|BA|G|2608
4V6Y|1|BA|U|2609
4V6Y|1|BA|C|2610
4V6Y|1|BA|C|2611
Current chains
- Chain BA
- 23S ribosomal RNA
Nearby chains
- Chain A1
- Transfer RNA; tRNA
- Chain A3
- Transfer RNA; tRNA
- Chain B0
- 50S ribosomal protein L29
- Chain BC
- 50S ribosomal protein L35
- Chain BD
- 50S ribosomal protein L36
- Chain BE
- 50S ribosomal protein L2
- Chain BL
- 50S ribosomal protein L13
- Chain BM
- 50S ribosomal protein L14
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