J5_4V72_003

3D structure

PDB id

4V72 (explore in PDB, NAKB, or RNA 3D Hub)

Description

E. coli 70S-fMetVal-tRNAVal-tRNAfMet complex in hybrid pre-translocation state (pre4)

Experimental method

ELECTRON MICROSCOPY

Resolution

13 Å

Loop

Sequence

CAAG*CGGACGGG*CAC*GACU*AGGCAG

Length

25 nucleotides

Bulged bases

4V72|1|AA|A|109, 4V72|1|AA|C|352, 4V72|1|AA|A|353

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4V72|1|AA|C|58
4V72|1|AA|A|59
4V72|1|AA|A|60
4V72|1|AA|G|61
*
4V72|1|AA|C|106
4V72|1|AA|G|107
4V72|1|AA|G|108
4V72|1|AA|A|109
4V72|1|AA|C|110
4V72|1|AA|G|111
4V72|1|AA|G|112
4V72|1|AA|G|113
*
4V72|1|AA|C|314
4V72|1|AA|A|315
4V72|1|AA|C|316
*
4V72|1|AA|G|337
4V72|1|AA|A|338
4V72|1|AA|C|339
4V72|1|AA|U|340
*
4V72|1|AA|A|349
4V72|1|AA|G|350
4V72|1|AA|G|351
4V72|1|AA|C|352
4V72|1|AA|A|353
4V72|1|AA|G|354

Current chains

Chain AA

16S ribosomal RNA

Nearby chains

Chain AP

30S ribosomal protein S16

Chain AT

30S ribosomal protein S20

Chain BK

50S ribosomal protein L14