J5_4V72_008

3D structure

PDB id

4V72 (explore in PDB, NAKB, or RNA 3D Hub)

Description

E. coli 70S-fMetVal-tRNAVal-tRNAfMet complex in hybrid pre-translocation state (pre4)

Experimental method

ELECTRON MICROSCOPY

Resolution

13 Å

Loop

Sequence

GGAACUAGGCAAAAUGG*CG*UC*GAUACCAGC*GGCUGUC

Length

37 nucleotides

Bulged bases

4V72|1|BA|U|1758, 4V72|1|BA|G|1763, 4V72|1|BA|G|1992

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4V72|1|BA|G|1666
4V72|1|BA|G|1667
4V72|1|BA|A|1668
4V72|1|BA|A|1669
4V72|1|BA|C|1670
4V72|1|BA|U|1671
4V72|1|BA|A|1672
4V72|1|BA|G|1673
4V72|1|BA|G|1674
4V72|1|BA|C|1675
4V72|1|BA|A|1676
4V72|1|BA|A|1677
4V72|1|BA|A|1678
4V72|1|BA|A|1679
4V72|1|BA|U|1680
4V72|1|BA|G|1681
4V72|1|BA|G|1682
*
4V72|1|BA|C|1706
4V72|1|BA|G|1707
*
4V72|1|BA|U|1751
4V72|1|BA|C|1752
*
4V72|1|BA|G|1756
4V72|1|BA|A|1757
4V72|1|BA|U|1758
4V72|1|BA|A|1759
4V72|1|BA|C|1760
4V72|1|BA|C|1761
4V72|1|BA|A|1762
4V72|1|BA|G|1763
4V72|1|BA|C|1764
*
4V72|1|BA|G|1988
4V72|1|BA|G|1989
4V72|1|BA|C|1990
4V72|1|BA|U|1991
4V72|1|BA|G|1992
4V72|1|BA|U|1993
4V72|1|BA|C|1994

Current chains

Chain BA

23S ribosomal RNA

Nearby chains

Chain AA

Small subunit ribosomal RNA; SSU rRNA

Chain BD

50S ribosomal protein L3

Chain BK

50S ribosomal protein L14

Chain BP

50S ribosomal protein L19