3D structure

PDB id
4V75 (explore in PDB, NAKB, or RNA 3D Hub)
Description
E. coli 70S-fMetVal-tRNAVal-tRNAfMet complex in classic post-translocation state (post1)
Experimental method
ELECTRON MICROSCOPY
Resolution
12 Å

Loop

Sequence
CUGG*CGUG*CUUUCAG*CAGAAGAAG*CAAG
Length
28 nucleotides
Bulged bases
None detected
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
J5_4V75_002 not in the Motif Atlas
Homologous match to J5_5J7L_002
Geometric discrepancy: 0.1835
The information below is about J5_5J7L_002
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
J5_67416.1
Basepair signature
cWW-F-F-F-cWW-tHW-F-tHW-tSS-cWW-cHW-cWW-F-cWW-F-cWW-F-F
Number of instances in this motif group
1

Unit IDs

4V75|1|AA|C|36
4V75|1|AA|U|37
4V75|1|AA|G|38
4V75|1|AA|G|39
*
4V75|1|AA|C|403
4V75|1|AA|G|404
4V75|1|AA|U|405
4V75|1|AA|G|406
*
4V75|1|AA|C|436
4V75|1|AA|U|437
4V75|1|AA|U|438
4V75|1|AA|U|439
4V75|1|AA|C|440
4V75|1|AA|A|441
4V75|1|AA|G|442
*
4V75|1|AA|C|492
4V75|1|AA|A|493
4V75|1|AA|G|494
4V75|1|AA|A|495
4V75|1|AA|A|496
4V75|1|AA|G|497
4V75|1|AA|A|498
4V75|1|AA|A|499
4V75|1|AA|G|500
*
4V75|1|AA|C|545
4V75|1|AA|A|546
4V75|1|AA|A|547
4V75|1|AA|G|548

Current chains

Chain AA
16S ribosomal RNA

Nearby chains

Chain AD
30S ribosomal protein S4
Chain AL
30S ribosomal protein S12

Coloring options:


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