3D structure

PDB id
4V75 (explore in PDB, NAKB, or RNA 3D Hub)
Description
E. coli 70S-fMetVal-tRNAVal-tRNAfMet complex in classic post-translocation state (post1)
Experimental method
ELECTRON MICROSCOPY
Resolution
12 Å

Loop

Sequence
GAAAGACC*GGAUAACAG*CCUCGAUGUC*GGUUUAG*CGGUCC
Length
40 nucleotides
Bulged bases
4V75|1|BA|A|2062, 4V75|1|BA|A|2448, 4V75|1|BA|U|2449, 4V75|1|BA|U|2609
QA status
Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

4V75|1|BA|G|2057
4V75|1|BA|A|2058
4V75|1|BA|A|2059
4V75|1|BA|A|2060
4V75|1|BA|G|2061
4V75|1|BA|A|2062
4V75|1|BA|C|2063
4V75|1|BA|C|2064
*
4V75|1|BA|G|2446
4V75|1|BA|G|2447
4V75|1|BA|A|2448
4V75|1|BA|U|2449
4V75|1|BA|A|2450
4V75|1|BA|A|2451
4V75|1|BA|C|2452
4V75|1|BA|A|2453
4V75|1|BA|G|2454
*
4V75|1|BA|C|2498
4V75|1|BA|C|2499
4V75|1|BA|U|2500
4V75|1|BA|C|2501
4V75|1|BA|G|2502
4V75|1|BA|A|2503
4V75|1|BA|U|2504
4V75|1|BA|G|2505
4V75|1|BA|U|2506
4V75|1|BA|C|2507
*
4V75|1|BA|G|2582
4V75|1|BA|G|2583
4V75|1|BA|U|2584
4V75|1|BA|U|2585
4V75|1|BA|U|2586
4V75|1|BA|A|2587
4V75|1|BA|G|2588
*
4V75|1|BA|C|2606
4V75|1|BA|G|2607
4V75|1|BA|G|2608
4V75|1|BA|U|2609
4V75|1|BA|C|2610
4V75|1|BA|C|2611

Current chains

Chain BA
23S ribosomal RNA

Nearby chains

Chain A1
Transfer RNA; tRNA
Chain B0
50S ribosomal protein L32
Chain BD
50S ribosomal protein L3
Chain BE
50S ribosomal protein L4
Chain BL
50S ribosomal protein L15
Chain BM
50S ribosomal protein L16
Chain BS
50S ribosomal protein L22

Coloring options:

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