J5_4V77_011

3D structure

PDB id

4V77 (explore in PDB, NAKB, or RNA 3D Hub)

Description

E. coli 70S-fMetVal-tRNAVal-tRNAfMet complex in intermediate post-translocation state (post2b)

Experimental method

ELECTRON MICROSCOPY

Resolution

17 Å

Loop

Sequence

GAAAGACC*GGAUAACA*UCGAUGU*GUUUAG*CGGUCC

Length

35 nucleotides

Bulged bases

4V77|1|BA|A|2062, 4V77|1|BA|A|2448, 4V77|1|BA|U|2609

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4V77|1|BA|G|2057
4V77|1|BA|A|2058
4V77|1|BA|A|2059
4V77|1|BA|A|2060
4V77|1|BA|G|2061
4V77|1|BA|A|2062
4V77|1|BA|C|2063
4V77|1|BA|C|2064
*
4V77|1|BA|G|2446
4V77|1|BA|G|2447
4V77|1|BA|A|2448
4V77|1|BA|U|2449
4V77|1|BA|A|2450
4V77|1|BA|A|2451
4V77|1|BA|C|2452
4V77|1|BA|A|2453
*
4V77|1|BA|U|2500
4V77|1|BA|C|2501
4V77|1|BA|G|2502
4V77|1|BA|A|2503
4V77|1|BA|U|2504
4V77|1|BA|G|2505
4V77|1|BA|U|2506
*
4V77|1|BA|G|2583
4V77|1|BA|U|2584
4V77|1|BA|U|2585
4V77|1|BA|U|2586
4V77|1|BA|A|2587
4V77|1|BA|G|2588
*
4V77|1|BA|C|2606
4V77|1|BA|G|2607
4V77|1|BA|G|2608
4V77|1|BA|U|2609
4V77|1|BA|C|2610
4V77|1|BA|C|2611

Current chains

Chain BA

23S ribosomal RNA

Nearby chains

Chain A1

Transfer RNA; tRNA

Chain B0

50S ribosomal protein L32

Chain BC

50S ribosomal protein L2

Chain BD

50S ribosomal protein L3

Chain BE

50S ribosomal protein L4

Chain BL

50S ribosomal protein L15

Chain BM

50S ribosomal protein L16