J5_4V78_010

3D structure

PDB id

4V78 (explore in PDB, NAKB, or RNA 3D Hub)

Description

E. coli 70S-fMetVal-tRNAVal-tRNAfMet complex in intermediate post-translocation state (post3a)

Experimental method

ELECTRON MICROSCOPY

Resolution

20 Å

Loop

Sequence

CGACU*AGAC*GUUC*GC*GCGAAUG

Length

22 nucleotides

Bulged bases

4V78|1|BA|U|1255

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4V78|1|BA|C|584
4V78|1|BA|G|585
4V78|1|BA|A|586
4V78|1|BA|C|587
4V78|1|BA|U|588
*
4V78|1|BA|A|668
4V78|1|BA|G|669
4V78|1|BA|A|670
4V78|1|BA|C|671
*
4V78|1|BA|G|809
4V78|1|BA|U|810
4V78|1|BA|U|811
4V78|1|BA|C|812
*
4V78|1|BA|G|1195
4V78|1|BA|C|1196
*
4V78|1|BA|G|1250
4V78|1|BA|C|1251
4V78|1|BA|G|1252
4V78|1|BA|A|1253
4V78|1|BA|A|1254
4V78|1|BA|U|1255
4V78|1|BA|G|1256

Current chains

Chain BA

23S ribosomal RNA

Nearby chains

Chain B3

50S ribosomal protein L35

Chain BE

50S ribosomal protein L4

Chain BL

50S ribosomal protein L15

Chain BQ

50S ribosomal protein L20

Chain BR

50S ribosomal protein L21