J5_4V79_005

3D structure

PDB id

4V79 (explore in PDB, NAKB, or RNA 3D Hub)

Description

E. coli 70S-fMetVal-tRNAVal-tRNAfMet complex in intermediate post-translocation state (post3b)

Experimental method

ELECTRON MICROSCOPY

Resolution

15 Å

Loop

Sequence

CAG*CGUAC*GGG*CAUAAGUAA*UGAAAUUG

Length

28 nucleotides

Bulged bases

4V79|1|BA|A|532, 4V79|1|BA|U|562, 4V79|1|BA|A|2015

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4V79|1|BA|C|531
4V79|1|BA|A|532
4V79|1|BA|G|533
*
4V79|1|BA|C|560
4V79|1|BA|G|561
4V79|1|BA|U|562
4V79|1|BA|A|563
4V79|1|BA|C|564
*
4V79|1|BA|G|577
4V79|1|BA|G|578
4V79|1|BA|G|579
*
4V79|1|BA|C|1261
4V79|1|BA|A|1262
4V79|1|BA|U|1263
4V79|1|BA|A|1264
4V79|1|BA|A|1265
4V79|1|BA|G|1266
4V79|1|BA|U|1267
4V79|1|BA|A|1268
4V79|1|BA|A|1269
*
4V79|1|BA|U|2011
4V79|1|BA|G|2012
4V79|1|BA|A|2013
4V79|1|BA|A|2014
4V79|1|BA|A|2015
4V79|1|BA|U|2016
4V79|1|BA|U|2017
4V79|1|BA|G|2018

Current chains

Chain BA

23S ribosomal RNA

Nearby chains

Chain B0

50S ribosomal protein L32

Chain BJ

50S ribosomal protein L13

Chain BQ

50S ribosomal protein L20

Chain BR

50S ribosomal protein L21

Chain BS

50S ribosomal protein L22