J5_4V7D_004

3D structure

PDB id

4V7D (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the Ribosome with Elongation Factor G Trapped in the Pre-Translocation State (pre-translocation 70S*tRNA*EF-G structure)

Experimental method

ELECTRON MICROSCOPY

Resolution

7.6 Å

Loop

Sequence

ACUAGGCAAAAUGG*CG*UC*GAUACCAGC*GGCUGU

Length

33 nucleotides

Bulged bases

4V7D|1|AA|U|1758, 4V7D|1|AA|G|1763, 4V7D|1|AA|G|1992

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4V7D|1|AA|A|1669
4V7D|1|AA|C|1670
4V7D|1|AA|U|1671
4V7D|1|AA|A|1672
4V7D|1|AA|G|1673
4V7D|1|AA|G|1674
4V7D|1|AA|C|1675
4V7D|1|AA|A|1676
4V7D|1|AA|A|1677
4V7D|1|AA|A|1678
4V7D|1|AA|A|1679
4V7D|1|AA|U|1680
4V7D|1|AA|G|1681
4V7D|1|AA|G|1682
*
4V7D|1|AA|C|1706
4V7D|1|AA|G|1707
*
4V7D|1|AA|U|1751
4V7D|1|AA|C|1752
*
4V7D|1|AA|G|1756
4V7D|1|AA|A|1757
4V7D|1|AA|U|1758
4V7D|1|AA|A|1759
4V7D|1|AA|C|1760
4V7D|1|AA|C|1761
4V7D|1|AA|A|1762
4V7D|1|AA|G|1763
4V7D|1|AA|C|1764
*
4V7D|1|AA|G|1988
4V7D|1|AA|G|1989
4V7D|1|AA|C|1990
4V7D|1|AA|U|1991
4V7D|1|AA|G|1992
4V7D|1|AA|U|1993

Current chains

Chain AA

23S ribosomal RNA

Nearby chains

Chain AE

50S ribosomal protein L3

Chain AN

50S ribosomal protein L14

Chain AS

50S ribosomal protein L19

Chain BA

Small subunit ribosomal RNA; SSU rRNA