J5_4V91_005
3D structure
- PDB id
- 4V91 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Kluyveromyces lactis 80S ribosome in complex with CrPV-IRES
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.7 Å
Loop
- Sequence
- AGAAGACC*GGAUAACUG*CUUCGAUGUC*GGUUUAG*UAGUUU
- Length
- 40 nucleotides
- Bulged bases
- 4V91|1|1|A|2817, 4V91|1|1|U|2954, 4V91|1|1|U|2978
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
4V91|1|1|A|2399
4V91|1|1|G|2400
4V91|1|1|A|2401
4V91|1|1|A|2402
4V91|1|1|G|2403
4V91|1|1|A|2404
4V91|1|1|C|2405
4V91|1|1|C|2406
*
4V91|1|1|G|2815
4V91|1|1|G|2816
4V91|1|1|A|2817
4V91|1|1|U|2818
4V91|1|1|A|2819
4V91|1|1|A|2820
4V91|1|1|C|2821
4V91|1|1|U|2822
4V91|1|1|G|2823
*
4V91|1|1|C|2867
4V91|1|1|U|2868
4V91|1|1|U|2869
4V91|1|1|C|2870
4V91|1|1|G|2871
4V91|1|1|A|2872
4V91|1|1|U|2873
4V91|1|1|G|2874
4V91|1|1|U|2875
4V91|1|1|C|2876
*
4V91|1|1|G|2951
4V91|1|1|G|2952
4V91|1|1|U|2953
4V91|1|1|U|2954
4V91|1|1|U|2955
4V91|1|1|A|2956
4V91|1|1|G|2957
*
4V91|1|1|U|2975
4V91|1|1|A|2976
4V91|1|1|G|2977
4V91|1|1|U|2978
4V91|1|1|U|2979
4V91|1|1|U|2980
Current chains
- Chain 1
- 25S RRNA
Nearby chains
- Chain A
- UL2
- Chain B
- UL3
- Chain C
- UL4
- Chain a
- UL15
- Chain b
- EL29
Coloring options: