J5_4WQY_011

3D structure

PDB id

4WQY (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the Thermus thermophilus 70S ribosome in complex with elongation factor G in the post-translocational state (without fusitic acid)

Experimental method

X-RAY DIFFRACTION

Resolution

2.8 Å

Loop

Sequence

CUAAAC*GGGUCGUG*CGAGUAC*GGAAUCUG*UAAG

Length

33 nucleotides

Bulged bases

4WQY|1|CA|U|272|||A, 4WQY|1|CA|U|405

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4WQY|1|CA|C|268
4WQY|1|CA|U|269
4WQY|1|CA|A|270
4WQY|1|CA|A|271
4WQY|1|CA|A|271|||A
4WQY|1|CA|C|271|||B
*
4WQY|1|CA|G|271|||V
4WQY|1|CA|G|271|||W
4WQY|1|CA|G|271|||X
4WQY|1|CA|U|271|||Y
4WQY|1|CA|C|271|||Z
4WQY|1|CA|G|272
4WQY|1|CA|U|272|||A
4WQY|1|CA|G|272|||B
*
4WQY|1|CA|C|366
4WQY|1|CA|G|370
4WQY|1|CA|A|371
4WQY|1|CA|G|372
4WQY|1|CA|U|373
4WQY|1|CA|A|374
4WQY|1|CA|C|375
*
4WQY|1|CA|G|399
4WQY|1|CA|G|400
4WQY|1|CA|A|401
4WQY|1|CA|A|402
4WQY|1|CA|U|403
4WQY|1|CA|C|404
4WQY|1|CA|U|405
4WQY|1|CA|G|406
*
4WQY|1|CA|U|421
4WQY|1|CA|A|422
4WQY|1|CA|A|423
4WQY|1|CA|G|424

Current chains

Chain CA

23S Ribosomal RNA

Nearby chains

Chain C1

50S ribosomal protein L28