J5_4WWW_014
3D structure
- PDB id
- 4WWW (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal structure of the E. coli ribosome bound to CEM-101
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.1 Å
Loop
- Sequence
- CAG*CGUACCU*AUGGG*CA*UG
- Length
- 19 nucleotides
- Bulged bases
- 4WWW|1|YA|A|532, 4WWW|1|YA|U|562
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
4WWW|1|YA|C|531
4WWW|1|YA|A|532
4WWW|1|YA|G|533
*
4WWW|1|YA|C|560
4WWW|1|YA|G|561
4WWW|1|YA|U|562
4WWW|1|YA|A|563
4WWW|1|YA|C|564
4WWW|1|YA|C|565
4WWW|1|YA|U|566
*
4WWW|1|YA|A|575
4WWW|1|YA|U|576
4WWW|1|YA|G|577
4WWW|1|YA|G|578
4WWW|1|YA|G|579
*
4WWW|1|YA|C|1261
4WWW|1|YA|A|1262
*
4WWW|1|YA|U|2017
4WWW|1|YA|G|2018
Current chains
- Chain YA
- 23S rRNA
Nearby chains
- Chain Y0
- 50S ribosomal protein L32
- Chain YE
- 50S ribosomal protein L4
- Chain YJ
- 50S ribosomal protein L13
- Chain YL
- 50S ribosomal protein L15
- Chain YQ
- 50S ribosomal protein L20
- Chain YR
- 50S ribosomal protein L21
- Chain YS
- 50S ribosomal protein L22
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