J5_5IMR_002
3D structure
- PDB id
- 5IMR (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of ribosome bound to cofactor at 5.7 angstrom resolution
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 5.7 Å
Loop
- Sequence
- ACAUGCAAG*CGGACGGGU*ACAG*CAC*GGCAGCAGU
- Length
- 34 nucleotides
- Bulged bases
- 5IMR|1|A|G|108, 5IMR|1|A|A|109, 5IMR|1|A|G|111
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
5IMR|1|A|A|53
5IMR|1|A|C|54
5IMR|1|A|A|55
5IMR|1|A|U|56
5IMR|1|A|G|57
5IMR|1|A|C|58
5IMR|1|A|A|59
5IMR|1|A|A|60
5IMR|1|A|G|61
*
5IMR|1|A|C|106
5IMR|1|A|G|107
5IMR|1|A|G|108
5IMR|1|A|A|109
5IMR|1|A|C|110
5IMR|1|A|G|111
5IMR|1|A|G|112
5IMR|1|A|G|113
5IMR|1|A|U|114
*
5IMR|1|A|A|313
5IMR|1|A|C|314
5IMR|1|A|A|315
5IMR|1|A|G|316
*
5IMR|1|A|C|337
5IMR|1|A|A|338
5IMR|1|A|C|339
*
5IMR|1|A|G|350
5IMR|1|A|G|351
5IMR|1|A|C|352
5IMR|1|A|A|353
5IMR|1|A|G|354
5IMR|1|A|C|355
5IMR|1|A|A|356
5IMR|1|A|G|357
5IMR|1|A|U|358
Current chains
- Chain A
- 16S ribosomal RNA
Nearby chains
- Chain C
- Elongation factor 4
- Chain T
- 30S ribosomal protein S16
- Chain X
- 30S ribosomal protein S20
- Chain g
- 50S ribosomal protein L14
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