J5_5LKS_002
3D structure
- PDB id
- 5LKS (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure-function insights reveal the human ribosome as a cancer target for antibiotics
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.6 Å
Loop
- Sequence
- GGAGUCUAACAC*GUGUUAGGACCCG*CUGGUUCC*GGCCGC*GGUGCAGAUC
- Length
- 49 nucleotides
- Bulged bases
- 5LKS|1|L5|C|2289, 5LKS|1|L5|G|2343, 5LKS|1|L5|U|2350
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
5LKS|1|L5|G|1335
5LKS|1|L5|G|1336
5LKS|1|L5|A|1337
5LKS|1|L5|G|1338
5LKS|1|L5|U|1339
5LKS|1|L5|C|1340
5LKS|1|L5|U|1341
5LKS|1|L5|A|1342
5LKS|1|L5|A|1343
5LKS|1|L5|C|1344
5LKS|1|L5|A|1345
5LKS|1|L5|C|1346
*
5LKS|1|L5|G|1510
5LKS|1|L5|U|1511
5LKS|1|L5|G|1512
5LKS|1|L5|U|1513
5LKS|1|L5|U|1514
5LKS|1|L5|A|1515
5LKS|1|L5|G|1516
5LKS|1|L5|G|1517
5LKS|1|L5|A|1518
5LKS|1|L5|C|1519
5LKS|1|L5|C|1520
5LKS|1|L5|C|1521
5LKS|1|L5|G|1522
*
5LKS|1|L5|C|1655
5LKS|1|L5|U|1656
5LKS|1|L5|G|1657
5LKS|1|L5|G|1658
5LKS|1|L5|U|1659
5LKS|1|L5|U|1660
5LKS|1|L5|C|1661
5LKS|1|L5|C|1662
*
5LKS|1|L5|G|2287
5LKS|1|L5|G|2288
5LKS|1|L5|C|2289
5LKS|1|L5|C|2290
5LKS|1|L5|G|2291
5LKS|1|L5|C|2292
*
5LKS|1|L5|G|2342
5LKS|1|L5|G|2343
5LKS|1|L5|U|2344
5LKS|1|L5|G|2345
5LKS|1|L5|C|2346
5LKS|1|L5|A|2347
5LKS|1|L5|G|2348
5LKS|1|L5|A|2349
5LKS|1|L5|U|2350
5LKS|1|L5|C|2351
Current chains
- Chain L5
- 28S ribosomal RNA
Nearby chains
- Chain L8
- 5.8S ribosomal RNA; 5.8S rRNA
- Chain LC
- 60S ribosomal protein L4
- Chain LL
- 60S ribosomal protein L13
- Chain LN
- 60S ribosomal protein L15
- Chain LQ
- 60S ribosomal protein L18
- Chain La
- 60S ribosomal protein L27a
- Chain Le
- 60S ribosomal protein L32
- Chain Lr
- 60S ribosomal protein L28
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