J5_5M1J_008
3D structure
- PDB id
- 5M1J (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Nonstop ribosomal complex bound with Dom34 and Hbs1
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.3 Å
Loop
- Sequence
- CAUG*CGAAUGGC*GAG*CACAU*AAGGCAG
- Length
- 27 nucleotides
- Bulged bases
- 5M1J|1|22|A|93, 5M1J|1|22|C|424
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
5M1J|1|22|C|54
5M1J|1|22|A|55
5M1J|1|22|U|56
5M1J|1|22|G|57
*
5M1J|1|22|C|90
5M1J|1|22|G|91
5M1J|1|22|A|92
5M1J|1|22|A|93
5M1J|1|22|U|94
5M1J|1|22|G|95
5M1J|1|22|G|96
5M1J|1|22|C|97
*
5M1J|1|22|G|386
5M1J|1|22|A|387
5M1J|1|22|G|388
*
5M1J|1|22|C|409
5M1J|1|22|A|410
5M1J|1|22|C|411
5M1J|1|22|A|412
5M1J|1|22|U|413
*
5M1J|1|22|A|420
5M1J|1|22|A|421
5M1J|1|22|G|422
5M1J|1|22|G|423
5M1J|1|22|C|424
5M1J|1|22|A|425
5M1J|1|22|G|426
Current chains
- Chain 22
- 18S ribosomal RNA
Nearby chains
- Chain E2
- 40S ribosomal protein S4-A
- Chain G2
- 40S ribosomal protein S6-A
- Chain I2
- 40S ribosomal protein S8-A
- Chain J2
- 40S ribosomal protein S9-A
- Chain V5
- 60S ribosomal protein L23-A
- Chain Y2
- 40S ribosomal protein S24-A
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