J5_5MEI_010
3D structure
- PDB id
- 5MEI (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal structure of Agelastatin A bound to the 80S ribosome
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.5 Å
Loop
- Sequence
- CUUGU*AAAUAAC*GGAAUGAG*CGAGGAACAAU*AUAG
- Length
- 35 nucleotides
- Bulged bases
- 5MEI|1|A|A|538, 5MEI|1|A|A|541
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
5MEI|1|A|C|31
5MEI|1|A|U|32
5MEI|1|A|U|33
5MEI|1|A|G|34
5MEI|1|A|U|35
*
5MEI|1|A|A|473
5MEI|1|A|A|474
5MEI|1|A|A|475
5MEI|1|A|U|476
5MEI|1|A|A|477
5MEI|1|A|A|478
5MEI|1|A|C|479
*
5MEI|1|A|G|509
5MEI|1|A|G|510
5MEI|1|A|A|511
5MEI|1|A|A|512
5MEI|1|A|U|513
5MEI|1|A|G|514
5MEI|1|A|A|515
5MEI|1|A|G|516
*
5MEI|1|A|C|536
5MEI|1|A|G|537
5MEI|1|A|A|538
5MEI|1|A|G|539
5MEI|1|A|G|540
5MEI|1|A|A|541
5MEI|1|A|A|542
5MEI|1|A|C|543
5MEI|1|A|A|544
5MEI|1|A|A|545
5MEI|1|A|U|546
*
5MEI|1|A|A|592
5MEI|1|A|U|593
5MEI|1|A|A|594
5MEI|1|A|G|595
Current chains
- Chain A
- 18S ribosomal RNA
Nearby chains
- Chain K
- 40S ribosomal protein S9-A
- Chain Y
- 40S ribosomal protein S23-A
- Chain f
- 40S ribosomal protein S30-A
Coloring options: