J5_5OT7_007
3D structure
- PDB id
- 5OT7 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Elongation factor G-ribosome complex captures in the absence of inhibitors.
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.8 Å
Loop
- Sequence
- AAAAGACC*GGAUAACAG*CCUCGAUGUC*GGUUCAG*CGGUCU
- Length
- 40 nucleotides
- Bulged bases
- 5OT7|1|4|A|2062, 5OT7|1|4|A|2448, 5OT7|1|4|U|2449, 5OT7|1|4|U|2585, 5OT7|1|4|U|2609
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
5OT7|1|4|A|2057
5OT7|1|4|A|2058
5OT7|1|4|A|2059
5OT7|1|4|A|2060
5OT7|1|4|G|2061
5OT7|1|4|A|2062
5OT7|1|4|C|2063
5OT7|1|4|C|2064
*
5OT7|1|4|G|2446
5OT7|1|4|G|2447
5OT7|1|4|A|2448
5OT7|1|4|U|2449
5OT7|1|4|A|2450
5OT7|1|4|A|2451
5OT7|1|4|C|2452
5OT7|1|4|A|2453
5OT7|1|4|G|2454
*
5OT7|1|4|C|2498
5OT7|1|4|C|2499
5OT7|1|4|U|2500
5OT7|1|4|C|2501
5OT7|1|4|G|2502
5OT7|1|4|A|2503
5OT7|1|4|U|2504
5OT7|1|4|G|2505
5OT7|1|4|U|2506
5OT7|1|4|C|2507
*
5OT7|1|4|G|2582
5OT7|1|4|G|2583
5OT7|1|4|U|2584
5OT7|1|4|U|2585
5OT7|1|4|C|2586
5OT7|1|4|A|2587
5OT7|1|4|G|2588
*
5OT7|1|4|C|2606
5OT7|1|4|G|2607
5OT7|1|4|G|2608
5OT7|1|4|U|2609
5OT7|1|4|C|2610
5OT7|1|4|U|2611
Current chains
- Chain 4
- 23S Ribosomal RNA
Nearby chains
- Chain a
- 50S ribosomal protein L32
- Chain g
- 50S ribosomal protein L2
- Chain h
- 50S ribosomal protein L3
- Chain i
- 50S ribosomal protein L4
- Chain q
- 50S ribosomal protein L15
- Chain r
- 50S ribosomal protein L16
- Chain x
- 50S ribosomal protein L22
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