J5_5T2C_007
3D structure
- PDB id
- 5T2C (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- CryoEM structure of the human ribosome at 3.6 Angstrom resolution
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.6 Å
Loop
- Sequence
- UUGAC*GUUUG*CA*UG*CAGAAAA
- Length
- 21 nucleotides
- Bulged bases
- 5T2C|1|A|G|3922, 5T2C|1|A|A|4376, 5T2C|1|A|G|4377, 5T2C|1|A|A|4378, 5T2C|1|A|A|4379
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
5T2C|1|A|U|3920
5T2C|1|A|U|3921
5T2C|1|A|G|3922
5T2C|1|A|A|3923
5T2C|1|A|C|3924
*
5T2C|1|A|G|4187
5T2C|1|A|U|4188
5T2C|1|A|U|4189
5T2C|1|A|U|4190
5T2C|1|A|G|4191
*
5T2C|1|A|C|4204
5T2C|1|A|A|4205
*
5T2C|1|A|U|4227
5T2C|1|A|G|4228
*
5T2C|1|A|C|4375
5T2C|1|A|A|4376
5T2C|1|A|G|4377
5T2C|1|A|A|4378
5T2C|1|A|A|4379
5T2C|1|A|A|4380
5T2C|1|A|A|4381
Current chains
- Chain A
- 28S rRNA
Nearby chains
- Chain An
- Transfer RNA; tRNA
- Chain D
- 60S ribosomal protein L8
- Chain K
- 60S ribosomal protein L18
- Chain N
- 60S ribosomal protein L21
- Chain U
- 60S ribosomal protein L27a
- Chain V
- 60S ribosomal protein L29
- Chain i
- 60S ribosomal protein L36a
- Chain t
- 60S ribosomal protein L15
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