J5_5TCU_001
3D structure
- PDB id
- 5TCU (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Methicillin sensitive Staphylococcus aureus 70S ribosome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.9 Å
Loop
- Sequence
- CAUGCAAGU*GCGGACGGG*CAC*GAC*GCAGCAG
- Length
- 31 nucleotides
- Bulged bases
- 5TCU|1|A|A|108
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
5TCU|1|A|C|55
5TCU|1|A|A|56
5TCU|1|A|U|57
5TCU|1|A|G|58
5TCU|1|A|C|59
5TCU|1|A|A|60
5TCU|1|A|A|61
5TCU|1|A|G|62
5TCU|1|A|U|63
*
5TCU|1|A|G|104
5TCU|1|A|C|105
5TCU|1|A|G|106
5TCU|1|A|G|107
5TCU|1|A|A|108
5TCU|1|A|C|109
5TCU|1|A|G|110
5TCU|1|A|G|111
5TCU|1|A|G|112
*
5TCU|1|A|C|322
5TCU|1|A|A|323
5TCU|1|A|C|324
*
5TCU|1|A|G|345
5TCU|1|A|A|346
5TCU|1|A|C|347
*
5TCU|1|A|G|359
5TCU|1|A|C|360
5TCU|1|A|A|361
5TCU|1|A|G|362
5TCU|1|A|C|363
5TCU|1|A|A|364
5TCU|1|A|G|365
Current chains
- Chain A
- 16S RRNA
Nearby chains
- Chain L1
- 50S ribosomal protein L19
- Chain LN
- 50S ribosomal protein L14
- Chain S3
- 30S ribosomal protein S12
- Chain S7
- 30S ribosomal protein S16
- Chain SA
- 30S ribosomal protein S20
Coloring options: