J5_5TCU_005
3D structure
- PDB id
- 5TCU (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Methicillin sensitive Staphylococcus aureus 70S ribosome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.9 Å
Loop
- Sequence
- CGAGUU*AGAC*GUUC*GCGUUC*GAAGUGAGAAUG
- Length
- 32 nucleotides
- Bulged bases
- 5TCU|1|B|G|1286, 5TCU|1|B|U|1293
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
5TCU|1|B|C|627
5TCU|1|B|G|628
5TCU|1|B|A|629
5TCU|1|B|G|630
5TCU|1|B|U|631
5TCU|1|B|U|632
*
5TCU|1|B|A|713
5TCU|1|B|G|714
5TCU|1|B|A|715
5TCU|1|B|C|716
*
5TCU|1|B|G|854
5TCU|1|B|U|855
5TCU|1|B|U|856
5TCU|1|B|C|857
*
5TCU|1|B|G|1234
5TCU|1|B|C|1235
5TCU|1|B|G|1236
5TCU|1|B|U|1237
5TCU|1|B|U|1238
5TCU|1|B|C|1239
*
5TCU|1|B|G|1283
5TCU|1|B|A|1284
5TCU|1|B|A|1285
5TCU|1|B|G|1286
5TCU|1|B|U|1287
5TCU|1|B|G|1288
5TCU|1|B|A|1289
5TCU|1|B|G|1290
5TCU|1|B|A|1291
5TCU|1|B|A|1292
5TCU|1|B|U|1293
5TCU|1|B|G|1294
Current chains
- Chain B
- 23S RRNA
Nearby chains
- Chain L3
- 50S ribosomal protein L20
- Chain L4
- 50S ribosomal protein L21
- Chain LH
- 50S ribosomal protein L35
- Chain LJ
- 50S ribosomal protein L4
- Chain LO
- 50S ribosomal protein L15
Coloring options: