J5_5TCU_010
3D structure
- PDB id
- 5TCU (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Methicillin sensitive Staphylococcus aureus 70S ribosome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.9 Å
Loop
- Sequence
- UAG*CGUGCCU*AUGAA*UG*CA
- Length
- 19 nucleotides
- Bulged bases
- 5TCU|1|B|A|577, 5TCU|1|B|U|605
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
5TCU|1|B|U|576
5TCU|1|B|A|577
5TCU|1|B|G|578
*
5TCU|1|B|C|603
5TCU|1|B|G|604
5TCU|1|B|U|605
5TCU|1|B|G|606
5TCU|1|B|C|607
5TCU|1|B|C|608
5TCU|1|B|U|609
*
5TCU|1|B|A|618
5TCU|1|B|U|619
5TCU|1|B|G|620
5TCU|1|B|A|621
5TCU|1|B|A|622
*
5TCU|1|B|U|1299
5TCU|1|B|G|1300
*
5TCU|1|B|C|2044
5TCU|1|B|A|2045
Current chains
- Chain B
- 23S RRNA
Nearby chains
- Chain L3
- 50S ribosomal protein L20
- Chain L4
- 50S ribosomal protein L21
- Chain L5
- 50S ribosomal protein L22
- Chain LE
- 50S ribosomal protein L32
- Chain LO
- 50S ribosomal protein L15
Coloring options: