J5_5ZLU_004
3D structure
- PDB id
- 5ZLU (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Ribosome Structure bound to ABC-F protein.
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.6 Å
Loop
- Sequence
- CGACUC*GGAC*GUUCUCCC*GGGAGCGUUC*GAAGUGCGAAUG
- Length
- 40 nucleotides
- Bulged bases
- 5ZLU|1|V|U|1199, 5ZLU|1|V|G|1248, 5ZLU|1|V|U|1255
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
5ZLU|1|V|C|584
5ZLU|1|V|G|585
5ZLU|1|V|A|586
5ZLU|1|V|C|587
5ZLU|1|V|U|588
5ZLU|1|V|C|589
*
5ZLU|1|V|G|668
5ZLU|1|V|G|669
5ZLU|1|V|A|670
5ZLU|1|V|C|671
*
5ZLU|1|V|G|809
5ZLU|1|V|U|810
5ZLU|1|V|U|811
5ZLU|1|V|C|812
5ZLU|1|V|U|813
5ZLU|1|V|C|814
5ZLU|1|V|C|815
5ZLU|1|V|C|816
*
5ZLU|1|V|G|1191
5ZLU|1|V|G|1192
5ZLU|1|V|G|1193
5ZLU|1|V|A|1194
5ZLU|1|V|G|1195
5ZLU|1|V|C|1196
5ZLU|1|V|G|1197
5ZLU|1|V|U|1198
5ZLU|1|V|U|1199
5ZLU|1|V|C|1200
*
5ZLU|1|V|G|1245
5ZLU|1|V|A|1246
5ZLU|1|V|A|1247
5ZLU|1|V|G|1248
5ZLU|1|V|U|1249
5ZLU|1|V|G|1250
5ZLU|1|V|C|1251
5ZLU|1|V|G|1252
5ZLU|1|V|A|1253
5ZLU|1|V|A|1254
5ZLU|1|V|U|1255
5ZLU|1|V|G|1256
Current chains
- Chain V
- 23S ribosomal RNA
Nearby chains
- Chain AA
- 50S ribosomal protein L35
- Chain b
- 50S ribosomal protein L4
- Chain i
- 50S ribosomal protein L15
- Chain n
- 50S ribosomal protein L20
- Chain o
- 50S ribosomal protein L21
Coloring options: