J5_5ZLU_006
3D structure
- PDB id
- 5ZLU (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Ribosome Structure bound to ABC-F protein.
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.6 Å
Loop
- Sequence
- ACGAAAAGACC*GGAUAACA*UCGAUGU*GUUCAG*CGGUCUCUAU
- Length
- 42 nucleotides
- Bulged bases
- 5ZLU|1|V|C|2055, 5ZLU|1|V|A|2062, 5ZLU|1|V|A|2448, 5ZLU|1|V|U|2449, 5ZLU|1|V|U|2585, 5ZLU|1|V|U|2609, 5ZLU|1|V|A|2614
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
5ZLU|1|V|A|2054
5ZLU|1|V|C|2055
5ZLU|1|V|G|2056
5ZLU|1|V|A|2057
5ZLU|1|V|A|2058
5ZLU|1|V|A|2059
5ZLU|1|V|A|2060
5ZLU|1|V|G|2061
5ZLU|1|V|A|2062
5ZLU|1|V|C|2063
5ZLU|1|V|C|2064
*
5ZLU|1|V|G|2446
5ZLU|1|V|G|2447
5ZLU|1|V|A|2448
5ZLU|1|V|U|2449
5ZLU|1|V|A|2450
5ZLU|1|V|A|2451
5ZLU|1|V|C|2452
5ZLU|1|V|A|2453
*
5ZLU|1|V|U|2500
5ZLU|1|V|C|2501
5ZLU|1|V|G|2502
5ZLU|1|V|A|2503
5ZLU|1|V|U|2504
5ZLU|1|V|G|2505
5ZLU|1|V|U|2506
*
5ZLU|1|V|G|2583
5ZLU|1|V|U|2584
5ZLU|1|V|U|2585
5ZLU|1|V|C|2586
5ZLU|1|V|A|2587
5ZLU|1|V|G|2588
*
5ZLU|1|V|C|2606
5ZLU|1|V|G|2607
5ZLU|1|V|G|2608
5ZLU|1|V|U|2609
5ZLU|1|V|C|2610
5ZLU|1|V|U|2611
5ZLU|1|V|C|2612
5ZLU|1|V|U|2613
5ZLU|1|V|A|2614
5ZLU|1|V|U|2615
Current chains
- Chain V
- 23S ribosomal RNA
Nearby chains
- Chain EE
- Macrolide efflux protein
- Chain Z
- 50S ribosomal protein L2
- Chain a
- 50S ribosomal protein L3
- Chain b
- 50S ribosomal protein L4
- Chain i
- 50S ribosomal protein L15
- Chain j
- 50S ribosomal protein L16
- Chain p
- 50S ribosomal protein L22
- Chain x
- 50S ribosomal protein L32
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