J5_5ZLU_008

3D structure

PDB id

5ZLU (explore in PDB, NAKB, or RNA 3D Hub)

Description

Ribosome Structure bound to ABC-F protein.

Experimental method

ELECTRON MICROSCOPY

Resolution

3.6 Å

Loop

Sequence

CUGGCG*CGCUUG*CUGAAC*GGUAAUAGCG*CGCGAG

Length

34 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

5ZLU|1|G|C|36
5ZLU|1|G|U|37
5ZLU|1|G|G|38
5ZLU|1|G|G|39
5ZLU|1|G|C|40
5ZLU|1|G|G|41
*
5ZLU|1|G|C|401
5ZLU|1|G|G|402
5ZLU|1|G|C|403
5ZLU|1|G|U|404
5ZLU|1|G|U|405
5ZLU|1|G|G|406
*
5ZLU|1|G|C|436
5ZLU|1|G|U|437
5ZLU|1|G|G|438
5ZLU|1|G|A|439
5ZLU|1|G|A|440
5ZLU|1|G|C|442
*
5ZLU|1|G|G|492
5ZLU|1|G|G|493
5ZLU|1|G|U|494
5ZLU|1|G|A|495
5ZLU|1|G|A|496
5ZLU|1|G|U|497
5ZLU|1|G|A|498
5ZLU|1|G|G|500
5ZLU|1|G|C|501
5ZLU|1|G|G|502
*
5ZLU|1|G|C|543
5ZLU|1|G|G|544
5ZLU|1|G|C|545
5ZLU|1|G|G|546
5ZLU|1|G|A|547
5ZLU|1|G|G|548

Current chains

Chain G

16S ribosomal RNA

Nearby chains

Chain J

30S ribosomal protein S4

Chain Q

30S ribosomal protein S12