J5_5ZLU_011
3D structure
- PDB id
- 5ZLU (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Ribosome Structure bound to ABC-F protein.
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.6 Å
Loop
- Sequence
- UUUA*UUUGACUGGGGCGGUCG*CGCC*GCCUAGUGAACC*GAUCAACGGAUAAAA
- Length
- 52 nucleotides
- Bulged bases
- 5ZLU|1|V|U|2076, 5ZLU|1|V|G|2250, 5ZLU|1|V|U|2390, 5ZLU|1|V|G|2428, 5ZLU|1|V|A|2430, 5ZLU|1|V|U|2431, 5ZLU|1|V|A|2432, 5ZLU|1|V|A|2433
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
5ZLU|1|V|U|2074
5ZLU|1|V|U|2075
5ZLU|1|V|U|2076
5ZLU|1|V|A|2077
*
5ZLU|1|V|U|2243
5ZLU|1|V|U|2244
5ZLU|1|V|U|2245
5ZLU|1|V|G|2246
5ZLU|1|V|A|2247
5ZLU|1|V|C|2248
5ZLU|1|V|U|2249
5ZLU|1|V|G|2250
5ZLU|1|V|G|2251
5ZLU|1|V|G|2252
5ZLU|1|V|G|2253
5ZLU|1|V|C|2254
5ZLU|1|V|G|2255
5ZLU|1|V|G|2256
5ZLU|1|V|U|2257
5ZLU|1|V|C|2258
5ZLU|1|V|G|2259
*
5ZLU|1|V|C|2281
5ZLU|1|V|G|2282
5ZLU|1|V|C|2283
5ZLU|1|V|C|2284
*
5ZLU|1|V|G|2384
5ZLU|1|V|C|2385
5ZLU|1|V|C|2386
5ZLU|1|V|U|2387
5ZLU|1|V|A|2388
5ZLU|1|V|G|2389
5ZLU|1|V|U|2390
5ZLU|1|V|G|2391
5ZLU|1|V|A|2392
5ZLU|1|V|A|2393
5ZLU|1|V|C|2394
5ZLU|1|V|C|2395
*
5ZLU|1|V|G|2421
5ZLU|1|V|A|2422
5ZLU|1|V|U|2423
5ZLU|1|V|C|2424
5ZLU|1|V|A|2425
5ZLU|1|V|A|2426
5ZLU|1|V|C|2427
5ZLU|1|V|G|2428
5ZLU|1|V|G|2429
5ZLU|1|V|A|2430
5ZLU|1|V|U|2431
5ZLU|1|V|A|2432
5ZLU|1|V|A|2433
5ZLU|1|V|A|2434
5ZLU|1|V|A|2435
Current chains
- Chain V
- 23S ribosomal RNA
Nearby chains
- Chain AA
- 50S ribosomal protein L35
- Chain DD
- Transfer RNA; tRNA
- Chain EE
- Macrolide efflux protein
- Chain Z
- 50S ribosomal protein L2
- Chain i
- 50S ribosomal protein L15
- Chain j
- 50S ribosomal protein L16
- Chain t
- 50S ribosomal protein L27
- Chain w
- 50S ribosomal protein L31
- Chain y
- 50S ribosomal protein L33
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