J5_6AWC_001

3D structure

PDB id

6AWC (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of 30S ribosomal subunit and RNA polymerase complex in rotated state

Experimental method

ELECTRON MICROSCOPY

Resolution

7.9 Å

Loop

Sequence

CUGG*CGUG*CUUU*AAG*CAAG

Length

19 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6AWC|1|A|C|36
6AWC|1|A|U|37
6AWC|1|A|G|38
6AWC|1|A|G|39
*
6AWC|1|A|C|403
6AWC|1|A|G|404
6AWC|1|A|U|405
6AWC|1|A|G|406
*
6AWC|1|A|C|436
6AWC|1|A|U|437
6AWC|1|A|U|438
6AWC|1|A|U|439
*
6AWC|1|A|A|498
6AWC|1|A|A|499
6AWC|1|A|G|500
*
6AWC|1|A|C|545
6AWC|1|A|A|546
6AWC|1|A|A|547
6AWC|1|A|G|548

Current chains

Chain A

16S rRNA

Nearby chains

Chain G

30S ribosomal protein S4

Chain O

30S ribosomal protein S12