J5_6AWD_001
3D structure
- PDB id
- 6AWD (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of 30S (S1 depleted) ribosomal subunit and RNA polymerase complex
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 8.1 Å
Loop
- Sequence
- CUGG*CGUG*CUUU*AAG*CAAG
- Length
- 19 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
6AWD|1|A|C|36
6AWD|1|A|U|37
6AWD|1|A|G|38
6AWD|1|A|G|39
*
6AWD|1|A|C|403
6AWD|1|A|G|404
6AWD|1|A|U|405
6AWD|1|A|G|406
*
6AWD|1|A|C|436
6AWD|1|A|U|437
6AWD|1|A|U|438
6AWD|1|A|U|439
*
6AWD|1|A|A|498
6AWD|1|A|A|499
6AWD|1|A|G|500
*
6AWD|1|A|C|545
6AWD|1|A|A|546
6AWD|1|A|A|547
6AWD|1|A|G|548
Current chains
- Chain A
- 16S rRNA
Nearby chains
- Chain G
- 30S ribosomal protein S4
- Chain O
- 30S ribosomal protein S12
Coloring options: