J5_6AZ1_001
3D structure
- PDB id
- 6AZ1 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of the small subunit of Leishmania ribosome bound to paromomycin
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.7 Å
Loop
- Sequence
- CU(OMU)GU*AAAUAG*CAAUGGG*CGAGUAACAAU*AAAG
- Length
- 33 nucleotides
- Bulged bases
- None detected
- QA status
- Modified nucleotides: OMU
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
6AZ1|1|1|C|31
6AZ1|1|1|U|32
6AZ1|1|1|OMU|33
6AZ1|1|1|G|34
6AZ1|1|1|U|35
*
6AZ1|1|1|A|521
6AZ1|1|1|A|522
6AZ1|1|1|A|523
6AZ1|1|1|U|524
6AZ1|1|1|A|525
6AZ1|1|1|G|526
*
6AZ1|1|1|C|555
6AZ1|1|1|A|556
6AZ1|1|1|A|557
6AZ1|1|1|U|558
6AZ1|1|1|G|559
6AZ1|1|1|G|560
6AZ1|1|1|G|561
*
6AZ1|1|1|C|585
6AZ1|1|1|G|586
6AZ1|1|1|A|587
6AZ1|1|1|G|588
6AZ1|1|1|U|589
6AZ1|1|1|A|590
6AZ1|1|1|A|591
6AZ1|1|1|C|592
6AZ1|1|1|A|593
6AZ1|1|1|A|594
6AZ1|1|1|U|595
*
6AZ1|1|1|A|641
6AZ1|1|1|A|642
6AZ1|1|1|A|643
6AZ1|1|1|G|644
Current chains
- Chain 1
- ribosomal RNA 18S
Nearby chains
- Chain D
- ribosomal protein S4
- Chain P
- ribosomal protein S12
- Chain e
- ribosomal protein S30e
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