J5_6BY1_011
3D structure
- PDB id
- 6BY1 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- E. coli pH03H9 complex
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.94 Å
Loop
- Sequence
- GAAAGACC*GGAUAACA*UCGAUGUC*GGUUUAG*CGGUCC
- Length
- 37 nucleotides
- Bulged bases
- 6BY1|1|CA|A|2062, 6BY1|1|CA|A|2448, 6BY1|1|CA|U|2609
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
6BY1|1|CA|G|2057
6BY1|1|CA|A|2058
6BY1|1|CA|A|2059
6BY1|1|CA|A|2060
6BY1|1|CA|G|2061
6BY1|1|CA|A|2062
6BY1|1|CA|C|2063
6BY1|1|CA|C|2064
*
6BY1|1|CA|G|2446
6BY1|1|CA|G|2447
6BY1|1|CA|A|2448
6BY1|1|CA|U|2449
6BY1|1|CA|A|2450
6BY1|1|CA|A|2451
6BY1|1|CA|C|2452
6BY1|1|CA|A|2453
*
6BY1|1|CA|U|2500
6BY1|1|CA|C|2501
6BY1|1|CA|G|2502
6BY1|1|CA|A|2503
6BY1|1|CA|U|2504
6BY1|1|CA|G|2505
6BY1|1|CA|U|2506
6BY1|1|CA|C|2507
*
6BY1|1|CA|G|2582
6BY1|1|CA|G|2583
6BY1|1|CA|U|2584
6BY1|1|CA|U|2585
6BY1|1|CA|U|2586
6BY1|1|CA|A|2587
6BY1|1|CA|G|2588
*
6BY1|1|CA|C|2606
6BY1|1|CA|G|2607
6BY1|1|CA|G|2608
6BY1|1|CA|U|2609
6BY1|1|CA|C|2610
6BY1|1|CA|C|2611
Current chains
- Chain CA
- 23S ribosomal RNA
Nearby chains
- Chain AV
- Transfer RNA; tRNA
- Chain AW
- Transfer RNA; tRNA
- Chain C1
- 50S ribosomal protein L32
- Chain CC
- 50S ribosomal protein L2
- Chain CD
- 50S ribosomal protein L3
- Chain CE
- 50S ribosomal protein L4
- Chain CL
- 50S ribosomal protein L15
- Chain CM
- 50S ribosomal protein L16
- Chain CS
- 50S ribosomal protein L22
Coloring options: