J5_6BY1_015

3D structure

PDB id

6BY1 (explore in PDB, NAKB, or RNA 3D Hub)

Description

E. coli pH03H9 complex

Experimental method

X-RAY DIFFRACTION

Resolution

3.94 Å

Loop

Sequence

CGACUU*AGACC*GGUUC*GC*GCGAAUG

Length

25 nucleotides

Bulged bases

6BY1|1|DA|U|1255

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6BY1|1|DA|C|584
6BY1|1|DA|G|585
6BY1|1|DA|A|586
6BY1|1|DA|C|587
6BY1|1|DA|U|588
6BY1|1|DA|U|589
*
6BY1|1|DA|A|668
6BY1|1|DA|G|669
6BY1|1|DA|A|670
6BY1|1|DA|C|671
6BY1|1|DA|C|672
*
6BY1|1|DA|G|808
6BY1|1|DA|G|809
6BY1|1|DA|U|810
6BY1|1|DA|U|811
6BY1|1|DA|C|812
*
6BY1|1|DA|G|1195
6BY1|1|DA|C|1196
*
6BY1|1|DA|G|1250
6BY1|1|DA|C|1251
6BY1|1|DA|G|1252
6BY1|1|DA|A|1253
6BY1|1|DA|A|1254
6BY1|1|DA|U|1255
6BY1|1|DA|G|1256

Current chains

Chain DA

23S ribosomal RNA

Nearby chains

Chain D4

50S ribosomal protein L35

Chain DE

50S ribosomal protein L4

Chain DL

50S ribosomal protein L15

Chain DQ

50S ribosomal protein L20

Chain DR

50S ribosomal protein L21