J5_6BZ8_001

3D structure

PDB id

6BZ8 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Thermus thermophilus 70S containing 16S G347U point mutation and near-cognate ASL Leucine in A site

Experimental method

X-RAY DIFFRACTION

Resolution

3.74 Å

Loop

Sequence

CUGG*CUUG*CUGAAC*GGUAAUAG*CGAG

Length

26 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

J5_6BZ8_001 not in the Motif Atlas

Homologous match to J5_4LFB_001

Geometric discrepancy: 0.0753

The information below is about J5_4LFB_001

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

J5_70703.1

Basepair signature

cWW-F-tWH-F-F-cWW-cWW-cWH-cWH-cWW-tSH-tWH-tHW-tHS-cWW

Number of instances in this motif group

1

Unit IDs

6BZ8|1|QA|C|36
6BZ8|1|QA|U|37
6BZ8|1|QA|G|38
6BZ8|1|QA|G|39
*
6BZ8|1|QA|C|403
6BZ8|1|QA|U|404
6BZ8|1|QA|U|405
6BZ8|1|QA|G|406
*
6BZ8|1|QA|C|436
6BZ8|1|QA|U|437
6BZ8|1|QA|G|438
6BZ8|1|QA|A|439
6BZ8|1|QA|A|440
6BZ8|1|QA|C|442
*
6BZ8|1|QA|G|492
6BZ8|1|QA|G|493
6BZ8|1|QA|U|494
6BZ8|1|QA|A|495
6BZ8|1|QA|A|496
6BZ8|1|QA|U|497
6BZ8|1|QA|A|498
6BZ8|1|QA|G|500
*
6BZ8|1|QA|C|545
6BZ8|1|QA|G|546
6BZ8|1|QA|A|547
6BZ8|1|QA|G|548

Current chains

Chain QA

16S rRNA

Nearby chains

Chain QD

30S ribosomal protein S4

Chain QL

30S ribosomal protein S12

Chain YI

50S ribosomal protein L9