J5_6CZR_020
3D structure
- PDB id
- 6CZR (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- The structure of amicetin bound to the 70S ribosome
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.14 Å
Loop
- Sequence
- CUGG*CUUG*CUGAAC*GGUAAUAG*CGAG
- Length
- 26 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J5_42859.1
- Basepair signature
- cWW-F-tWH-F-F-cWW-cWW-cWH-F-F-cWW-tSH-tWH-F-tHS-F-cWW
- Number of instances in this motif group
- 2
Unit IDs
6CZR|1|1a|C|37
6CZR|1|1a|U|38
6CZR|1|1a|G|39
6CZR|1|1a|G|40
*
6CZR|1|1a|C|399
6CZR|1|1a|U|400
6CZR|1|1a|U|401
6CZR|1|1a|G|402
*
6CZR|1|1a|C|432
6CZR|1|1a|U|433
6CZR|1|1a|G|434
6CZR|1|1a|A|435
6CZR|1|1a|A|436
6CZR|1|1a|C|437
*
6CZR|1|1a|G|477
6CZR|1|1a|G|478
6CZR|1|1a|U|479
6CZR|1|1a|A|480
6CZR|1|1a|A|481
6CZR|1|1a|U|482
6CZR|1|1a|A|483
6CZR|1|1a|G|484
*
6CZR|1|1a|C|529
6CZR|1|1a|G|530
6CZR|1|1a|A|531
6CZR|1|1a|G|532
Current chains
- Chain 1a
- 16S Ribosomal RNA
Nearby chains
- Chain 1d
- 30S ribosomal protein S4
- Chain 1l
- 30S ribosomal protein S12
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