J5_6ERI_006
3D structure
- PDB id
- 6ERI (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the chloroplast ribosome with chl-RRF and hibernation-promoting factor
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3 Å
Loop
- Sequence
- GAAAGACC*GGAUAACA*UCGAUGUC*GGUUCAG*CGGUCC
- Length
- 37 nucleotides
- Bulged bases
- 6ERI|1|AA|A|2076, 6ERI|1|AA|A|2465, 6ERI|1|AA|U|2602, 6ERI|1|AA|U|2626
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
6ERI|1|AA|G|2071
6ERI|1|AA|A|2072
6ERI|1|AA|A|2073
6ERI|1|AA|A|2074
6ERI|1|AA|G|2075
6ERI|1|AA|A|2076
6ERI|1|AA|C|2077
6ERI|1|AA|C|2078
*
6ERI|1|AA|G|2463
6ERI|1|AA|G|2464
6ERI|1|AA|A|2465
6ERI|1|AA|U|2466
6ERI|1|AA|A|2467
6ERI|1|AA|A|2468
6ERI|1|AA|C|2469
6ERI|1|AA|A|2470
*
6ERI|1|AA|U|2517
6ERI|1|AA|C|2518
6ERI|1|AA|G|2519
6ERI|1|AA|A|2520
6ERI|1|AA|U|2521
6ERI|1|AA|G|2522
6ERI|1|AA|U|2523
6ERI|1|AA|C|2524
*
6ERI|1|AA|G|2599
6ERI|1|AA|G|2600
6ERI|1|AA|U|2601
6ERI|1|AA|U|2602
6ERI|1|AA|C|2603
6ERI|1|AA|A|2604
6ERI|1|AA|G|2605
*
6ERI|1|AA|C|2623
6ERI|1|AA|G|2624
6ERI|1|AA|G|2625
6ERI|1|AA|U|2626
6ERI|1|AA|C|2627
6ERI|1|AA|C|2628
Current chains
- Chain AA
- 23S ribosomal RNA
Nearby chains
- Chain AC
- 50S ribosomal protein L2, chloroplastic
- Chain AD
- 50S ribosomal protein L3, chloroplastic
- Chain AE
- 50S ribosomal protein L4, chloroplastic
- Chain AL
- 50S ribosomal protein L15, chloroplastic
- Chain AM
- 50S ribosomal protein L16, chloroplastic
- Chain AS
- 50S ribosomal protein L22, chloroplastic
- Chain Aa
- 50S ribosomal protein L32, chloroplastic
Coloring options: