J5_6ERI_008

3D structure

PDB id

6ERI (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the chloroplast ribosome with chl-RRF and hibernation-promoting factor

Experimental method

ELECTRON MICROSCOPY

Resolution

3 Å

Loop

Sequence

CUGG*CGUG*CUUUUC*GGAAUAAG*CAAG

Length

26 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6ERI|1|BA|C|38
6ERI|1|BA|U|39
6ERI|1|BA|G|40
6ERI|1|BA|G|41
*
6ERI|1|BA|C|375
6ERI|1|BA|G|376
6ERI|1|BA|U|377
6ERI|1|BA|G|378
*
6ERI|1|BA|C|408
6ERI|1|BA|U|409
6ERI|1|BA|U|410
6ERI|1|BA|U|411
6ERI|1|BA|U|412
6ERI|1|BA|C|413
*
6ERI|1|BA|G|442
6ERI|1|BA|G|443
6ERI|1|BA|A|444
6ERI|1|BA|A|445
6ERI|1|BA|U|446
6ERI|1|BA|A|447
6ERI|1|BA|A|448
6ERI|1|BA|G|449
*
6ERI|1|BA|C|494
6ERI|1|BA|A|495
6ERI|1|BA|A|496
6ERI|1|BA|G|497

Current chains

Chain BA

16S ribosomal RNA

Nearby chains

Chain BD

30S ribosomal protein S4, chloroplastic

Chain BL

30S ribosomal protein S12, chloroplastic