J5_6FTG_001
3D structure
- PDB id
- 6FTG (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Subtomogram average of OST-containing ribosome-translocon complexes from canine rough microsomal membranes
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 9.1 Å
Loop
- Sequence
- UG*CGAUGAAG*CGAACG*CG*UA
- Length
- 20 nucleotides
- Bulged bases
- 6FTG|1|w|U|38
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
6FTG|1|u|U|20
6FTG|1|u|G|21
*
6FTG|1|w|C|35
6FTG|1|w|G|36
6FTG|1|w|A|37
6FTG|1|w|U|38
6FTG|1|w|G|39
6FTG|1|w|A|40
6FTG|1|w|A|41
6FTG|1|w|G|42
*
6FTG|1|w|C|101
6FTG|1|w|G|102
6FTG|1|w|A|103
6FTG|1|w|A|104
6FTG|1|w|C|105
6FTG|1|w|G|106
*
6FTG|1|w|C|113
6FTG|1|w|G|114
*
6FTG|1|w|U|136
6FTG|1|w|A|137
Current chains
- Chain u
- 28S ribosomal RNA
- Chain w
- 5.8S ribosomal RNA
Nearby chains
- Chain N
- Ribosomal protein L15
- Chain X
- uL23
- Chain h
- eL29
- Chain j
- Ribosomal protein L37
- Chain l
- eL39
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